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Publications

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Journal Articles

Meinke, Anita; Peters, Rick; Knols, Ruud H; Swanenburg, Jaap; Karlen, Walter

Feedback on Trunk Movements From an Electronic Game to Improve Postural Balance in People With Nonspecific Low Back Pain: Pilot Randomized Controlled Trial Journal Article

In: JMIR Serious Games, vol. 10, no. 2, pp. e31685, 2022, ISSN: 2291-9279.

Abstract | Links | BibTeX

Coleman, Jesse; Ginsburg, Amy Sarah; Macharia, William M; Ochieng, Roseline; Chomba, Dorothy; Zhou, Guohai; Dunsmuir, Dustin; Karlen, Walter; Ansermino, J Mark

Assessment of neonatal respiratory rate variability Journal Article

In: J Clin Monit Comput, 2022, ISSN: 1573-2614.

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Krugliakova, Elena; Skorucak, Jelena; Sousouri, Georgia; Leach, Sven; Snipes, Sophia; Ferster, Maria Laura; Poian, Giulia Da; Karlen, Walter; Huber, Reto

Boosting Recovery During Sleep by Means of Auditory Stimulation Journal Article

In: Front Neurosci, vol. 16, pp. 755958, 2022, ISSN: 1662-4548.

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Ferster, Maria Laura; Poian, Giulia Da; Menachery, Kiran; Schreiner, Simon J; Lustenberger, Caroline; Maric, Angelina; Huber, Reto; Baumann, Christian R; Karlen, Walter

Benchmarking Real-Time Algorithms for In-Phase Auditory Stimulation of Low Amplitude Slow Waves With Wearable EEG Devices During Sleep Journal Article

In: IEEE Trans Biomed Eng, vol. 69, no. 9, pp. 2916–2925, 2022, ISSN: 1558-2531.

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Lustenberger, Caroline; Ferster, M Laura; Huwiler, Stephanie; Brogli, Luzius; Werth, Esther; Huber, Reto; Karlen, Walter

Auditory deep sleep stimulation in older adults at home: a randomized crossover trial Journal Article

In: Commun Med (Lond), vol. 2, pp. 30, 2022, ISSN: 2730-664X.

Abstract | Links | BibTeX

Fröhlich, Stefan; Helbling, Moritz; Fucentese, Sandro F; Karlen, Walter; Frey, Walter O; Spörri, Jörg

Injury risks among elite competitive alpine skiers are underestimated if not registered prospectively, over the entire season and regardless of whether requiring medical attention Journal Article

In: Knee Surgery, Sports Traumatology, Arthroscopy, vol. 29, no. 5, pp. 1635–1643, 2021, ISSN: 0942-2056.

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Schwab, Patrick; Karlen, Walter

A Deep Learning Approach to Diagnosing Multiple Sclerosis from Smartphone Data Journal Article

In: IEEE Journal of Biomedical and Health Informatics, vol. 25, no. 4, pp. 1284–1291, 2021, ISSN: 2168-2194.

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Ferretti, Agata; Ienca, Marcello; Sheehan, Mark; Blasimme, Alessandro; Dove, Edward S; Farsides, Bobbie; Friesen, Phoebe; Kahn, Jeff; Karlen, Walter; Kleist, Peter; Liao, S Matthew; Nebeker, Camille; Samuel, Gabrielle; Shabani, Mahsa; Velarde, Minerva Rivas; Vayena, Effy

Ethics review of big data research: What should stay and what should be reformed? Journal Article

In: BMC Med Ethics, vol. 22, no. 1, pp. 51, 2021, ISSN: 1472-6939.

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Scebba, Gaetano; Poian, Giulia Da; Karlen, Walter

Multispectral Video Fusion for Non-Contact Monitoring of Respiratory Rate and Apnea Journal Article

In: IEEE Transactions on Biomedical Engineering, vol. 68, no. 1, pp. 350–9, 2021, ISSN: 0018-9294.

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Leach, Sven; Chung, Ku-young; Tüshaus, Laura; Huber, Reto; Karlen, Walter

A Protocol for Comparing Dry and Wet EEG Electrodes During Sleep Journal Article

In: Frontiers in Neuroscience, vol. 14, pp. 586, 2020, ISSN: 1662-453X.

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Schwab, Patrick; Linhardt, Lorenz; Bauer, Stefan; Buhmann, Joachim M; Karlen, Walter

Learning Counterfactual Representations for Estimating Individual Dose-Response Curves Journal Article

In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 34, no. 04, pp. 5612–5619, 2020, ISSN: 2374-3468.

Abstract | Links | BibTeX

Schwab, Patrick; Linhardt, Lorenz; Bauer, Stefan; Buhmann, Joachim M; Karlen, Walter

Learning Counterfactual Representations for Estimating Individual Dose-Response Curves Journal Article

In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 34, no. 04, pp. 5612–5619, 2020, ISSN: 2374-3468.

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Behar, Joachim A; Liu, Chengyu; Kotzen, Kevin; Tsutsui, Kenta; Corino, Valentina D A; Singh, Janmajay; Pimentel, Marco A F; Warrick, Philip; Zaunseder, Sebastian; Andreotti, Fernando; Sebag, David; Kopanitsa, Georgy; McSharry, Patrick E; Karlen, Walter; Karmakar, Chandan; Clifford, Gari D

Remote health diagnosis and monitoring in the time of COVID-19 Journal Article

In: Physiological Measurement, vol. 41, no. 10, 2020, ISSN: 1361-6579.

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Ding, Xiao-Rong; Yan, Bryan P; Karlen, Walter; Zhang, Yuan-Ting; Tsang, Hon Ki

Pulse transit time based respiratory rate estimation with singular spectrum analysis Journal Article

In: Medical & Biological Engineering & Computing, vol. 58, no. 2, pp. 257–266, 2020, ISSN: 0140-0118.

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Hüser, Matthias; Kündig, Adrian; Karlen, Walter; Luca, Valeria De; Jaggi, Martin

Forecasting intracranial hypertension using multi-scale waveform metrics Journal Article

In: Physiological Measurement, vol. 41, no. 1, pp. 014001, 2020, ISSN: 1361-6579.

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Muroi, Carl; Meier, Sando; Luca, Valeria De; Mack, David J; Strässle, Christian; Schwab, Patrick; Karlen, Walter; Keller, Emanuela

Automated False Alarm Reduction in a Real-Life Intensive Care Setting Using Motion Detection Journal Article

In: Neurocritical Care, vol. 32, no. 2, pp. 419–426, 2020, ISSN: 1541-6933.

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Hartinger, Stella M; Nuño, Nestor; Hattendorf, Jan; Verastegui, Hector; Karlen, Walter; Ortiz, Mariela; Mäusezahl, Daniel

A factorial cluster-randomised controlled trial combining home-environmental and early child development interventions to improve child health and development: rationale, trial design and baseline findings. Journal Article

In: BMC medical research methodology, vol. 20, no. 1, pp. 73, 2020, ISSN: 1471-2288.

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Zhou, Guohai; Karlen, Walter; Brant, Rollin; Wiens, Matthew; Kissoon, Niranjan; Ansermino, Mark J

A transformation of oxygen saturation (the saturation virtual shunt) to improve clinical prediction model calibration and interpretation Journal Article

In: Pediatric Research, pp. 3–10, 2019, ISSN: 0031-3998.

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Schwab, Patrick; Karlen, Walter

PhoneMD: Learning to Diagnose Parkinson's Disease from Smartphone Data Journal Article

In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 33, pp. 1118–25, 2019, ISSN: 2374-3468.

Abstract | Links | BibTeX

Schwab, Patrick; Karlen, Walter

PhoneMD: Learning to Diagnose Parkinson's Disease from Smartphone Data Journal Article

In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 33, pp. 1118–25, 2019, ISSN: 2374-3468.

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Schwab, Patrick; Miladinovic, Djordje; Karlen, Walter

Granger-Causal Attentive Mixtures of Experts: Learning Important Features with Neural Networks Journal Article

In: Proceedings of the AAAI Conference on Artificial Intelligence, vol. 33, pp. 4846–53, 2019, ISSN: 2374-3468.

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Ferster, Maria Laura; Lustenberger, Caroline; Karlen, Walter

Configurable Mobile System for Autonomous High-Quality Sleep Monitoring and Closed-Loop Acoustic Stimulation Journal Article

In: IEEE Sensors Letters, vol. 3, no. 5, pp. 1–4, 2019, ISSN: 2475-1472.

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Ferster, Maria Laura; Lustenberger, Caroline; Karlen, Walter

Configurable Mobile System for Autonomous High-Quality Sleep Monitoring and Closed-Loop Acoustic Stimulation Journal Article

In: IEEE Sensors Letters, vol. 3, no. 5, pp. 1–4, 2019, ISSN: 2475-1472.

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Tüshaus, Laura; Moreo, Monica; Zhang, Jia; Hartinger, Stella Maria; Mäusezahl, Daniel; Karlen, Walter

Physiologically driven, altitude-adaptive model for the interpretation of pediatric oxygen saturation at altitudes above 2,000 m a.s.l. Journal Article

In: Journal of Applied Physiology, vol. 127, no. 3, pp. 847–57, 2019, ISSN: 8750-7587.

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Pham, Ngoc M; Rusch, Sebastian; Temiz, Yuksel; Beck, Hans-Peter; Karlen, Walter; Delamarche, Emmanuel

Immuno-gold silver staining assays on capillary-driven microfluidics for the detection of malaria antigens. Journal Article

In: Biomedical microdevices, vol. 21, no. 1, pp. 24, 2019, ISSN: 1572-8781.

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Azza, Yasmine; Grueschow, Marcus; Karlen, Walter; Seifritz, Erich; Kleim, Birgit

How stress affects sleep and mental health: Nocturnal heartrate increases during prolonged stress and interacts with childhood trauma exposure to predict anxiety. Journal Article

In: Sleep, 2019, ISSN: 1550-9109.

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Cherbuin, Mathias; Zelder, Felix; Karlen, Walter

Quantifying cyanide in water and foodstuff using corrin-based CyanoKit technologies and a smartphone Journal Article

In: The Analyst, vol. 144, no. 1, pp. 130–136, 2019, ISSN: 0003-2654.

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Zhang, Jia; Tüshaus, Laura; Martínez, Néstor Nuño; Moreo, Monica; Verastegui, Hector; Hartinger, Stella M; Mäusezahl, Daniel; Karlen, Walter

Data Integrity–Based Methodology and Checklist for Identifying Implementation Risks of Physiological Sensing in Mobile Health Projects: Quantitative and Qualitative Analysis Journal Article

In: JMIR mHealth and uHealth, vol. 6, no. 12, pp. e11896, 2018, ISSN: 2291-5222.

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Pham, Ngoc M; Rusch, Sebastian; Temiz, Yuksel; Lovchik, Robert D; Beck, Hans-Peter; Karlen, Walter; Delamarche, Emmanuel

A bead-based immunogold-silver staining assay on capillary-driven microfluidics. Journal Article

In: Biomedical microdevices, vol. 20, no. 2, pp. 41, 2018, ISSN: 1572-8781.

Abstract | Links | BibTeX

Schwab, Patrick; Linhardt, Lorenz; Karlen, Walter

Perfect Match: A Simple Method for Learning Representations For Counterfactual Inference With Neural Networks Journal Article

In: ArXiv Preprint, 2018.

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Kammerer, Tobias; Faihs, Valentina; Hulde, Nikolai; Bayer, Andreas; Hübner, Max; Brettner, Florian; Karlen, Walter; Kröpfl, Julia Maria; Rehm, Markus; Spengler, Christina; Schäfer, Simon Thomas

Changes of hemodynamic and cerebral oxygenation after exercise in normobaric and hypobaric hypoxia: associations with acute mountain sickness. Journal Article

In: Annals of occupational and environmental medicine, vol. 30, no. 1, pp. 66, 2018, ISSN: 2052-4374.

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Pham, Ngoc Minh; Karlen, Walter; Beck, Hans-Peter; Delamarche, Emmanuel

Malaria and the ‘last' parasite: how can technology help? Journal Article

In: Malaria Journal, vol. 17, no. 1, pp. 260, 2018, ISSN: 1475-2875.

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Schwab, Patrick; Scebba, Gaetano Claudio; Zhang, Jia; Delai, Marco; Karlen, Walter

Beat by Beat: Classifying Cardiac Arrhythmias with Recurrent Neural Networks Journal Article

In: Computing in Cardiology (CinC), vol. 44, pp. 1–4, 2017.

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Ettinger, Kate Michi; Pharaoh, Hamilton; Buckman, Reymound Yaw; Conradie, Hoffie; Karlen, Walter

Building quality mHealth for low resource settings Journal Article

In: Journal of Medical Engineering & Technology, vol. 40, no. 7-8, pp. 431–43, 2016, ISSN: 0309-1902.

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Garde, Ainara; Zhou, Guohai; Raihana, Shahreen; Dunsmuir, Dustin; Karlen, Walter; Dekhordi, Parastoo; Huda, Tanvir; Arifeen, Shams El; Larson, Charles; Kissoon, Niranjan; Dumont, Guy A; Ansermino, Mark J

Respiratory rate and pulse oximetry derived information as predictors of hospital admission in young children in Bangladesh: a prospective observational study Journal Article

In: BMJ Open, vol. 6, no. 8, pp. e011094, 2016, ISSN: 2044-6055.

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Dehkordi, Parastoo; Garde, Ainara; Karlen, Walter; Petersen, Christian L; Wensley, David; Dumont, Guy A; Ansermino, J Mark

Evaluation of cardiac modulation in children in response to apnea/hypopnea using the Phone Oximeter™ Journal Article

In: Physiological Measurement, vol. 37, no. 2, pp. 187–202, 2016, ISSN: 0967-3334.

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Karlen, Walter; Garde, Ainara; Myers, Dorothy; Scheffer, Cornie; Ansermino, Mark J; Dumont, Guy A

Estimation of Respiratory Rate From Photoplethysmographic Imaging Videos Compared to Pulse Oximetry Journal Article

In: IEEE Journal of Biomedical and Health Informatics, vol. 19, no. 4, pp. 1331–8, 2015, ISSN: 2168-2194.

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Wiens, Matthew O; Gan, Heng; Barigye, Celestine; Zhou, Guohai; Kumbakumba, Elias; Kabakyenga, Jerome; Kissoon, Niranjan; Ansermino, Mark J; Karlen, Walter; Larson, Charles P; MacLeod, Stuart M

A cohort study of morbidity, mortality and health seeking behavior following rural health center visits by children under 12 in Southwestern Uganda Journal Article

In: PLoS ONE, vol. 10, no. 1, pp. e0118055, 2015.

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Raihana, Shahreen; Dunsmuir, Dustin; Huda, Tanvir; Zhou, Guohai; Rahman, Qazi Sadeq-ur; Garde, Ainara; Moinuddin, Md; Karlen, Walter; Dumont, Guy A; Kissoon, Niranjan; Arifeen, Shams El; Larson, Charles; Ansermino, Mark J

Development and Internal Validation of a Predictive Model Including Pulse Oximetry for Hospitalization of Under-Five Children in Bangladesh Journal Article

In: PLoS ONE, vol. 10, no. 11, pp. e0143213, 2015, ISSN: 1932-6203.

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Gan, Heng; Karlen, Walter; Dunsmuir, Dustin; Zhou, Guohai; Chiu, Michelle; Dumont, Guy A; Ansermino, Mark J

The Performance of a Mobile Phone Respiratory Rate Counter Compared to the WHO ARI Timer Journal Article

In: Journal of Healthcare Engineering, vol. 6, no. 4, pp. 691–704, 2015.

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Karlen, Walter; Petersen, Christian L; Dumont, Guy A; Ansermino, Mark J

Variability in estimating shunt from single pulse oximetry measurements Journal Article

In: Physiological Measurement, vol. 36, no. 5, pp. 967–981, 2015, ISSN: 0967-3334.

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Garde, Ainara; Dehkordi, Parastoo; Karlen, Walter; Wensley, David; Ansermino, Mark J; Dumont, Guy A

Development of a screening tool for sleep disordered breathing in children using the phone oximeter™. Journal Article

In: PLoS ONE, vol. 9, no. 11, pp. e112959, 2014, ISSN: 1932-6203.

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Crede, Sarah; der Merwe, G Van; Hutchinson, J; Woods, David; Karlen, Walter; Lawn, Joy

Where do pulse oximeter probes break? Journal Article

In: Journal of clinical monitoring and computing, vol. 28, no. 3, pp. 309–14, 2014.

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Karlen, Walter; Gan, Heng; Chiu, Michelle; Dunsmuir, Dustin; Zhou, Guohai; Dumont, Guy A; Ansermino, Mark J

Improving the accuracy and efficiency of respiratory rate measurements in children using mobile devices. Journal Article

In: PLoS ONE, vol. 9, no. 6, pp. e99266, 2014, ISSN: 1932-6203.

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Garde, Ainara; Karlen, Walter; Ansermino, Mark J; Dumont, Guy A

Estimating respiratory and heart rates from the correntropy spectral density of the photoplethysmogram. Journal Article

In: PLoS ONE, vol. 9, no. 1, pp. e86427, 2014, ISSN: 1932-6203.

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Karlen, Walter; Raman, Srinivas; Ansermino, Mark J; Dumont, Guy A

Multiparameter respiratory rate estimation from the photoplethysmogram. Journal Article

In: IEEE Transactions on Biomedical Engineering, vol. 60, no. 7, pp. 1946–53, 2013, ISSN: 1558-2531.

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Karlen, Walter; Raman, Srinivas; Ansermino, Mark J; Dumont, Guy A

Multiparameter respiratory rate estimation from the photoplethysmogram. Journal Article

In: IEEE Transactions on Biomedical Engineering, vol. 60, no. 7, pp. 1946–53, 2013, ISSN: 1558-2531.

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Brouse, Chris J; Karlen, Walter; Dumont, Guy A; Myers, Dorothy; Cooke, Erin; Stinson, Jonathan; Lim, Joanne; Ansermino, Mark J

Monitoring nociception during general anesthesia with cardiorespiratory coherence. Journal Article

In: Journal of clinical monitoring and computing, vol. 27, no. 5, pp. 551–60, 2013, ISSN: 1573-2614.

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Karlen, Walter; Kobayashi, K; Ansermino, Mark J; Dumont, Guy A

Photoplethysmogram signal quality estimation using repeated Gaussian filters and cross-correlation. Journal Article

In: Physiological Measurement, vol. 33, no. 10, pp. 1617–29, 2012, ISSN: 1361-6579.

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Chandler, John R; Cooke, Erin; Petersen, Chris; Karlen, Walter; Froese, N; Lim, Joanne; Ansermino, Mark J

Pulse oximeter plethysmograph variation and its relationship to the arterial waveform in mechanically ventilated children. Journal Article

In: Journal of clinical monitoring and computing, vol. 26, no. 3, pp. 145–51, 2012, ISSN: 1573-2614.

Abstract | Links | BibTeX